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DOI10.1021/acs.chemrestox.6b00347
Development and Validation of a Computational Model for Androgen Receptor Activity
Kleinstreuer, Nicole C.1; Ceger, Patricia2; Watt, Eric D.3; Martin, Matthew3; Houck, Keith3; Browne, Patience4; Thomas, Russell S.3; Casey, Warren M.1; Dix, David J.; Allen, David2,5; Sakamuru, Srilatha6; Xia, Menghang6; Huang, Ruili6; Judson, Richard3
发表日期2017-04-01
ISSN0893-228X
卷号30期号:4页码:946-964
英文摘要

Testing thousands of chemicals to identify potential androgen receptor (AR) agonists or antagonists would cost millions of dollars and take decades to complete using current validated methods. High-throughput in vitro screening (HTS) and computational toxicology approaches can more rapidly and inexpensively identify potential androgen-active chemicals. We integrated 11 HTS ToxCast/Tox21 in vitro assays into a computational network model to distinguish true AR pathway activity from technology-specific assay interference. The in vitro HTS assays probed perturbations of the AR pathway at multiple points (receptor binding, coregulator recruitment, gene transcription, and protein production) and multiple cell types. Confirmatory in vitro antagonist assay data and cytotoxicity information were used as additional flags for potential nonspecific activity. Validating such alternative testing strategies requires high quality reference data. We compiled 158 putative androgen-active and-inactive chemicals from a combination of international test method validation efforts and semiautomated systematic literature reviews. Detailed in vitro assay information and results were compiled into a single database using a standardized ontology. Reference chemical concentrations that activated or inhibited AR pathway activity were identified to establish a range of potencies with reproducible reference chemical results. Comparison with existing Tier 1 AR binding data from the U.S. EPA Endocrine Disruptor Screening Program revealed that the model identified binders at relevant test concentrations (<100 mu M) and was more sensitive to antagonist activity. The AR pathway model based on the ToxCast/Tox21 assays had balanced accuracies of 95.2% for agonist (n = 29) and 97.5% for antagonist (n = 28) reference chemicals. Out of 1855 chemicals screened in the AR pathway model, 220 chemicals demonstrated AR agonist or antagonist activity and an additional 174 chemicals were predicted to have potential weak AR pathway activity.


语种英语
WOS记录号WOS:000399626100008
来源期刊CHEMICAL RESEARCH IN TOXICOLOGY
来源机构美国环保署
文献类型期刊论文
条目标识符http://gcip.llas.ac.cn/handle/2XKMVOVA/60609
作者单位1.NIEHS, NIH, DNTP, NTP Interagency Ctr Evaluat Alternat Toxicol Meth, Res Triangle Pk, NC 27713 USA;
2.Integrated Lab Syst Inc, Res Triangle Pk, NC 27560 USA;
3.US EPA, ORD, Natl Ctr Computat Toxicol, Res Triangle Pk, NC 27711 USA;
4.OECD Environm Directorate, Environm Hlth & Safety Div, F-75775 Paris, France;
5.US EPA, OCSPP, Off Sci Coordinat & Policy, Washington, DC 20460 USA;
6.NIH, Natl Ctr Adv Translat Sci, Bldg 10, Bethesda, MD 20892 USA
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GB/T 7714
Kleinstreuer, Nicole C.,Ceger, Patricia,Watt, Eric D.,et al. Development and Validation of a Computational Model for Androgen Receptor Activity[J]. 美国环保署,2017,30(4):946-964.
APA Kleinstreuer, Nicole C..,Ceger, Patricia.,Watt, Eric D..,Martin, Matthew.,Houck, Keith.,...&Judson, Richard.(2017).Development and Validation of a Computational Model for Androgen Receptor Activity.CHEMICAL RESEARCH IN TOXICOLOGY,30(4),946-964.
MLA Kleinstreuer, Nicole C.,et al."Development and Validation of a Computational Model for Androgen Receptor Activity".CHEMICAL RESEARCH IN TOXICOLOGY 30.4(2017):946-964.
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