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A communal catalogue reveals Earth's multiscale microbial diversity 期刊论文
NATURE, 2017, 卷号: 551, 期号: 7681
作者:  Thompson, Luke R.;  Sanders, Jon G.;  McDonald, Daniel;  Amir, Amnon;  Ladau, Joshua;  Locey, Kenneth J.;  Prill, Robert J.;  Tripathi, Anupriya;  Gibbons, Sean M.;  Ackermann, Gail;  Navas-Molina, Jose A.;  Janssen, Stefan;  Kopylova, Evguenia;  Vazquez-Baeza, Yoshiki;  Gonzalez, Antonio;  Morton, James T.;  Mirarab, Siavash;  Xu, Zhenjiang Zech;  Jiang, Lingjing;  Haroon, Mohamed F.;  Kanbar, Jad;  Zhu, Qiyun;  Song, Se Jin;  Kosciolek, Tomasz;  Bokulich, Nicholas A.;  Lefler, Joshua;  Brislawn, Colin J.;  Humphrey, Gregory;  Owens, Sarah M.;  Hampton-Marcell, Jarrad;  Berg-Lyons, Donna;  McKenzie, Valerie;  Fierer, Noah;  Fuhrman, Jed A.;  Clauset, Aaron;  Stevens, Rick L.;  Shade, Ashley;  Pollard, Katherine S.;  Goodwin, Kelly D.;  Jansson, Janet K.;  Gilbert, Jack A.;  Knight, Rob;  Rivera, Jose L. Agosto;  Al-Moosawi, Lisa;  Alverdy, John;  Amato, Katherine R.;  Andras, Jason;  Angenent, Largus T.;  Antonopoulos, Dionysios A.;  Apprill, Amy;  Armitage, David;  Ballantine, Kate;  Barta, Jiri;  Baum, Julia K.;  Berry, Allison;  Bhatnagar, Ashish;  Bhatnagar, Monica;  Biddle, Jennifer F.;  Bittner, Lucie;  Boldgiv, Bazartseren;  Bottos, Eric;  Boyer, Donal M.;  Braun, Josephine;  Brazelton, William;  Brearley, Francis Q.;  Campbell, Alexandra H.;  Caporaso, J. Gregory;  Cardona, Cesar;  Carroll, JoLynn;  Cary, S. Craig;  Casper, Brenda B.;  Charles, Trevor C.;  Chu, Haiyan;  Claar, Danielle C.;  Clark, Robert G.;  Clayton, Jonathan B.;  Clemente, Jose C.;  Cochran, Alyssa;  Coleman, Maureen L.;  Collins, Gavin;  Colwell, Rita R.;  Contreras, Monica;  Crary, Benjamin B.;  Creer, Simon;  Cristol, Daniel A.;  Crump, Byron C.;  Cui, Duoying;  Daly, Sarah E.;  Davalos, Liliana;  Dawson, Russell D.;  Defazio, Jennifer;  Delsuc, Frederic;  Dionisi, Hebe M.;  Dominguez-Bello, Maria Gloria;  Dowell, Robin;  Dubinsky, Eric A.;  Dunn, Peter O.;  Ercolini, Danilo;  Espinoza, Robert E.;  Ezenwa, Vanessa;  Fenner, Nathalie;  Findlay, Helen S.;  Fleming, Irma D.;  Fogliano, Vincenzo;  Forsman, Anna;  Freeman, Chris;  Friedman, Elliot S.;  Galindo, Giancarlo;  Garcia, Liza;  Alexandra Garcia-Amado, Maria;  Garshelis, David;  Gasser, Robin B.;  Gerdts, Gunnar;  Gibson, Molly K.;  Gifford, Isaac;  Gill, Ryan T.;  Giray, Tugrul;  Gittel, Antje;  Golyshin, Peter;  Gong, Donglai;  Grossart, Hans-Peter;  Guyton, Kristina;  Haig, Sarah-Jane;  Hale, Vanessa;  Hall, Ross Stephen;  Hallam, Steven J.;  Handley, Kim M.;  Hasan, Nur A.;  Haydon, Shane R.;  Hickman, Jonathan E.;  Hidalgo, Glida;  Hofmockel, Kirsten S.;  Hooker, Jeff;  Hulth, Stefan;  Hultman, Jenni;  Hyde, Embriette;  Ibanez-Alamo, Juan Diego;  Jastrow, Julie D.;  Jex, Aaron R.;  Johnson, L. Scott;  Johnston, Eric R.;  Joseph, Stephen;  Jurburg, Stephanie D.;  Jurelevicius, Diogo;  Karlsson, Anders;  Karlsson, Roger;  Kauppinen, Seth;  Kellogg, Colleen T. E.;  Kennedy, Suzanne J.;  Kerkhof, Lee J.;  King, Gary M.;  Kling, George W.;  Koehler, Anson V.;  Krezalek, Monika;  Kueneman, Jordan;  Lamendella, Regina;  Landon, Emily M.;  Lane-deGraaf, Kelly;  LaRoche, Julie;  Larsen, Peter;  Laverock, Bonnie;  Lax, Simon;  Lentino, Miguel;  Levin, Iris I.;  Liancourt, Pierre;  Liang, Wenju;  Linz, Alexandra M.;  Lipson, David A.;  Liu, Yongqin;  Lladser, Manuel E.;  Lozada, Mariana;  Spirito, Catherine M.;  MacCormack, Walter P.;  MacRae-Crerar, Aurora;  Magris, Magda;  Martin-Platero, Antonio M.;  Martin-Vivaldi, Manuel;  Margarita Martinez, L.;  Martinez-Bueno, Manuel;  Marzinelli, Ezequiel M.;  Mason, Olivia U.;  Mayer, Gregory D.;  McDevitt-Irwin, Jamie M.;  McDonald, James E.;  McGuire, Krista L.;  McMahon, Katherine D.;  McMinds, Ryan;  Medina, Monica;  Mendelson, Joseph R., III;  Metcalf, Jessica L.;  Meyer, Folker;  Michelangeli, Fabian;  Miller, Kim;  Mills, David A.;  Minich, Jeremiah;  Mocali, Stefano;  Moitinho-Silva, Lucas;  Moore, Anni;  Morgan-Kiss, Rachael M.;  Munroe, Paul;  Myrold, David;  Neufeld, Josh D.;  Ni, Yingying;  Nicol, Graeme W.;  Nielsen, Shaun;  Nissimov, Jozef I.;  Niu, Kefeng;  Nolan, Matthew J.;  Noyce, Karen;  O'Brien, Sarah L.;  Okamoto, Noriko;  Orlando, Ludovic;  Castellano, Yadira Ortiz;  Osuolale, Olayinka;  Oswald, Wyatt;  Parnell, Jacob;  Peralta-Sanchez, Juan M.;  Petraitis, Peter;  Pfister, Catherine;  Pilon-Smits, Elizabeth;  Piombino, Paola;  Pointing, Stephen B.;  Pollock, F. Joseph;  Potter, Caitlin;  Prithiviraj, Bharath;  Quince, Christopher;  Rani, Asha;  Ranjan, Ravi;  Rao, Subramanya;  Rees, Andrew P.;  Richardson, Miles;  Riebesell, Ulf;  Robinson, Carol;  Rockne, Karl J.;  Rodriguezl, Selena Marie;  Rohwer, Forest;  Roundstone, Wayne;  Safran, Rebecca J.;  Sangwan, Naseer;  Sanz, Virginia;  Schrenk, Matthew;  Schrenzel, Mark D.;  Scott, Nicole M.;  Seger, Rita L.;  Seguin-Orlando, Andaine;  Seldin, Lucy;  Seyler, Lauren M.;  Shakhsheer, Baddr;  Sheets, Gabriela M.;  Shen, Congcong;  Shi, Yu;  Shin, Hakdong;  Shogan, Benjamin D.;  Shutler, Dave;  Siegel, Jeffrey;  Simmons, Steve;  Sjoling, Sara;  Smith, Daniel P.;  Soler, Juan J.;  Sperling, Martin;  Steinberg, Peter D.;  Stephens, Brent;  Stevens, Melita A.;  Taghavi, Safiyh;  Tai, Vera;  Tait, Karen;  Tan, Chia L.;  Tas, Neslihan;  Taylor, D. Lee;  Thomas, Torsten;  Timling, Ina;  Turner, Benjamin L.;  Urich, Tim;  Ursell, Luke K.;  van der Lelie, Daniel;  Van Treuren, William;  van Zwieten, Lukas;  Vargas-Robles, Daniela;  Thurber, Rebecca Vega;  Vitaglione, Paola;  Walker, Donald A.;  Walters, William A.;  Wang, Shi;  Wang, Tao;  Weaver, Tom;  Webster, Nicole S.;  Wehrle, Beck;  Weisenhorn, Pamela;  Weiss, Sophie;  Werner, Jeffrey J.;  West, Kristin;  Whitehead, Andrew;  Whitehead, Susan R.;  Whittingham, Linda A.;  Willerslev, Eske;  Williams, Allison E.;  Wood, Stephen A.;  Woodhams, Douglas C.;  Yang, Yeqin;  Zaneveld, Jesse;  Zarraonaindia, Iratxe;  Zhang, Qikun;  Zhao, Hongxia
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OPERON COPY NUMBER  BACTERIAL DIVERSITY  MARINE BACTERIAL  GLOBAL PATTERNS  COMMUNITIES  NESTEDNESS  ONTOLOGY  CONSISTENT  EVOLUTION  ARCHAEAL  
The tomato genome sequence provides insights into fleshy fruit evolution 期刊论文
NATURE, 2012, 卷号: 485, 期号: 7400
作者:  Sato, Shusei;  Tabata, Satoshi;  Hirakawa, Hideki;  Asamizu, Erika;  Shirasawa, Kenta;  Isobe, Sachiko;  Kaneko, Takakazu;  Nakamura, Yasukazu;  Shibata, Daisuke;  Aoki, Koh;  Egholm, Michael;  Knight, James;  Bogden, Robert;  Li, Changbao;  Shuang, Yang;  Xu, Xun;  Pan, Shengkai;  Cheng, Shifeng;  Liu, Xin;  Ren, Yuanyuan;  Wang, Jun;  Albiero, Alessandro;  Dal Pero, Francesca;  Todesco, Sara;  Van Eck, Joyce;  Buels, Robert M.;  Bombarely, Aureliano;  Gosselin, Joseph R.;  Huang, Minyun;  Leto, Jonathan A.;  Menda, Naama;  Strickler, Susan;  Mao, Linyong;  Gao, Shan;  Tecle, Isaak Y.;  York, Thomas;  Zheng, Yi;  Vrebalov, Julia T.;  Lee, JeMin;  Zhong, Silin;  Mueller, Lukas A.;  Stiekema, Willem J.;  Ribeca, Paolo;  Alioto, Tyler;  Yang, Wencai;  Huang, Sanwen;  Du, Yongchen;  Zhang, Zhonghua;  Gao, Jianchang;  Guo, Yanmei;  Wang, Xiaoxuan;  Li, Ying;  He, Jun;  Li, Chuanyou;  Cheng, Zhukuan;  Zuo, Jianru;  Ren, Jianfeng;  Zhao, Jiuhai;  Yan, Liuhua;  Jiang, Hongling;  Wang, Bao;  Li, Hongshuang;  Li, Zhenjun;  Fu, Fuyou;  Chen, Bingtang;  Han, Bin;  Feng, Qi;  Fan, Danlin;  Wang, Ying;  Ling, Hongqing;  Xue, Yongbiao;  Ware, Doreen;  McCombie, W. Richard;  Lippman, Zachary B.;  Chia, Jer-Ming;  Jiang, Ke;  Pasternak, Shiran;  Gelley, Laura;  Kramer, Melissa;  Anderson, Lorinda K.;  Chang, Song-Bin;  Royer, Suzanne M.;  Shearer, Lindsay A.;  Stack, Stephen M.;  Rose, Jocelyn K. C.;  Xu, Yimin;  Eannetta, Nancy;  Matas, Antonio J.;  McQuinn, Ryan;  Tanksley, Steven D.;  Camara, Francisco;  Guigo, Roderic;  Rombauts, Stephane;  Fawcett, Jeffrey;  Van de Peer, Yves;  Zamir, Dani;  Liang, Chunbo;  Spannagl, Manuel;  Gundlach, Heidrun;  Bruggmann, Remy;  Mayer, Klaus;  Jia, Zhiqi;  Zhang, Junhong;  Ye, Zhibiao;  Bishop, Gerard J.;  Butcher, Sarah;  Lopez-Cobollo, Rosa;  Buchan, Daniel;  Filippis, Ioannis;  Abbott, James;  Dixit, Rekha;  Singh, Manju;  Singh, Archana;  Pal, Jitendra Kumar;  Pandit, Awadhesh;  Singh, Pradeep Kumar;  Mahato, Ajay Kumar;  Dogra, Vivek;  Gaikwad, Kishor;  Sharma, Tilak Raj;  Mohapatra, Trilochan;  Singh, Nagendra Kumar;  Causse, Mathilde;  Rothan, Christophe;  Schiex, Thomas;  Noirot, Celine;  Bellec, Arnaud;  Klopp, Christophe;  Delalande, Corinne;  Berges, Helene;  Mariette, Jerome;  Frasse, Pierre;  Vautrin, Sonia;  Zouine, Mohamed;  Latche, Alain;  Rousseau, Christine;  Regad, Farid;  Pech, Jean-Claude;  Philippot, Murielle;  Bouzayen, Mondher;  Pericard, Pierre;  Osorio, Sonia;  Fernandez del Carmen, Asuncion;  Monforte, Antonio;  Granell, Antonio;  Fernandez-Munoz, Rafael;  Conte, Mariana;  Lichtenstein, Gabriel;  Carrari, Fernando;  De Bellis, Gianluca;  Fuligni, Fabio;  Peano, Clelia;  Grandillo, Silvana;  Termolino, Pasquale;  Pietrella, Marco;  Fantini, Elio;  Falcone, Giulia;  Fiore, Alessia;  Giuliano, Giovanni;  Lopez, Loredana;  Facella, Paolo;  Perrotta, Gaetano;  Daddiego, Loretta;  Bryan, Glenn;  Orozco, Modesto;  Pastor, Xavier;  Torrents, David;  van Schriek, Keygene N. V. Marco G. M.;  Feron, Richard M. C.;  van Oeveren, Jan;  de Heer, Peter;  daPonte, Lorena;  Jacobs-Oomen, Saskia;  Cariaso, Mike;  Prins, Marcel;  van Eijk, Michiel J. T.;  Janssen, Antoine;  van Haaren, Mark J. J.;  Jo, Sung-Hwan;  Kim, Jungeun;  Kwon, Suk-Yoon;  Kim, Sangmi;  Koo, Dal-Hoe;  Lee, Sanghyeob;  Hur, Cheol-Goo;  Clouser, Christopher;  Rico, Alain;  Hallab, Asis;  Gebhardt, Christiane;  Klee, Kathrin;  Joecker, Anika;  Warfsmann, Jens;  Goebel, Ulrike;  Kawamura, Shingo;  Yano, Kentaro;  Sherman, Jamie D.;  Fukuoka, Hiroyuki;  Negoro, Satomi;  Bhutty, Sarita;  Chowdhury, Parul;  Chattopadhyay, Debasis;  Datema, Erwin;  Smit, Sandra;  Schijlen, Eliog. W. M.;  van de Belt, Jose;  van Haarst, Jan C.;  Peters, Sander A.;  van Staveren, Marjo J.;  Henkens, Marleen H. C.;  Mooyman, Paul J. W.;  Hesselink, Thamara;  van Ham, Roeland C. H. J.;  Jiang, Guoyong;  Droege, Marcus;  Choi, Doil;  Kang, Byung-Cheol;  Kim, Byung Dong;  Park, Minkyu;  Kim, Seungill;  Yeom, Seon-In;  Lee, Yong-Hwan;  Choi, Yang-Do;  Li, Guangcun;  Gao, Jianwei;  Liu, Yongsheng;  Huang, Shengxiong;  Fernandez-Pedrosa, Victoria;  Collado, Carmen;  Zuniga, Sheila;  Wang, Guoping;  Cade, Rebecca;  Dietrich, Robert A.;  Rogers, Jane;  Knapp, Sandra;  Fei, Zhangjun;  White, Ruth A.;  Thannhauser, Theodore W.;  Giovannoni, James J.;  Angel Botella, Miguel;  Gilbert, Louise;  Gonzalez, Ramon;  Goicoechea, Jose Luis;  Yu, Yeisoo;  Kudrna, David;  Collura, Kristi;  Wissotski, Marina;  Wing, Rod;  Schoof, Heiko;  Meyers, Blake C.;  Gurazada, Aishwarya Bala;  Green, Pamela J.;  Mathur, Saloni;  Vyas, Shailendra;  Solanke, Amolkumar U.;  Kumar, Rahul;  Gupta, Vikrant;  Sharma, Arun K.;  Khurana, Paramjit;  Khurana, Jitendra P.;  Tyagi, Akhilesh K.;  Dalmay, Tamas;  Mohorianu, Irina;  Walts, Brandon;  Chamala, Srikar;  Barbazuk, W. Brad;  Li, Jingping;  Guo, Hui;  Lee, Tae-Ho;  Wang, Yupeng;  Zhang, Dong;  Paterson, Andrew H.;  Wang, Xiyin;  Tang, Haibao;  Barone, Amalia;  Chiusano, Maria Luisa;  Ercolano, Maria Raffaella;  D'Agostino, Nunzio;  Di Filippo, Miriam;  Traini, Alessandra;  Sanseverino, Walter;  Frusciante, Luigi;  Seymour, Graham B.;  Elharam, Mounir;  Fu, Ying;  Hua, Axin;  Kenton, Steven;  Lewis, Jennifer;  Lin, Shaoping;  Najar, Fares;  Lai, Hongshing;  Qin, Baifang;  Qu, Chunmei;  Shi, Ruihua;  White, Douglas;  White, James;  Xing, Yanbo;  Yang, Keqin;  Yi, Jing;  Yao, Ziyun;  Zhou, Liping;  Roe, Bruce A.;  Vezzi, Alessandro;  D'Angelo, Michela;  Zimbello, Rosanna;  Schiavon, Riccardo;  Caniato, Elisa;  Rigobello, Chiara;  Campagna, Davide;  Vitulo, Nicola;  Valle, Giorgio;  Nelson, David R.;  De Paoli, Emanuele;  Szinay, Dora;  de Jong, Hans H.;  Bai, Yuling;  Visser, Richard G. F.;  Lankhorst, Rene M. Klein;  Beasley, Helen;  McLaren, Karen;  Nicholson, Christine;  Riddle, Claire;  Gianese, Giulio
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