| DOI | 10.1038/nature11119
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| The tomato genome sequence provides insights into fleshy fruit evolution |
| Sato, Shusei; Tabata, Satoshi; Hirakawa, Hideki; Asamizu, Erika; Shirasawa, Kenta; Isobe, Sachiko; Kaneko, Takakazu; Nakamura, Yasukazu; Shibata, Daisuke; Aoki, Koh; Egholm, Michael; Knight, James; Bogden, Robert; Li, Changbao; Shuang, Yang; Xu, Xun; Pan, Shengkai; Cheng, Shifeng; Liu, Xin; Ren, Yuanyuan; Wang, Jun; Albiero, Alessandro; Dal Pero, Francesca; Todesco, Sara; Van Eck, Joyce; Buels, Robert M.; Bombarely, Aureliano; Gosselin, Joseph R.; Huang, Minyun; Leto, Jonathan A.; Menda, Naama; Strickler, Susan; Mao, Linyong; Gao, Shan; Tecle, Isaak Y.; York, Thomas; Zheng, Yi; Vrebalov, Julia T.; Lee, JeMin; Zhong, Silin; Mueller, Lukas A.; Stiekema, Willem J.; Ribeca, Paolo; Alioto, Tyler; Yang, Wencai; Huang, Sanwen; Du, Yongchen; Zhang, Zhonghua; Gao, Jianchang; Guo, Yanmei; Wang, Xiaoxuan; Li, Ying; He, Jun; Li, Chuanyou; Cheng, Zhukuan; Zuo, Jianru; Ren, Jianfeng; Zhao, Jiuhai; Yan, Liuhua; Jiang, Hongling; Wang, Bao; Li, Hongshuang; Li, Zhenjun; Fu, Fuyou; Chen, Bingtang; Han, Bin; Feng, Qi ; Fan, Danlin; Wang, Ying; Ling, Hongqing; Xue, Yongbiao; Ware, Doreen; McCombie, W. Richard; Lippman, Zachary B.; Chia, Jer-Ming; Jiang, Ke; Pasternak, Shiran; Gelley, Laura; Kramer, Melissa; Anderson, Lorinda K.; Chang, Song-Bin; Royer, Suzanne M.; Shearer, Lindsay A.; Stack, Stephen M.; Rose, Jocelyn K. C.; Xu, Yimin; Eannetta, Nancy; Matas, Antonio J.; McQuinn, Ryan; Tanksley, Steven D.; Camara, Francisco; Guigo, Roderic; Rombauts, Stephane; Fawcett, Jeffrey; Van de Peer, Yves; Zamir, Dani; Liang, Chunbo; Spannagl, Manuel; Gundlach, Heidrun; Bruggmann, Remy; Mayer, Klaus; Jia, Zhiqi; Zhang, Junhong; Ye, Zhibiao; Bishop, Gerard J.; Butcher, Sarah; Lopez-Cobollo, Rosa; Buchan, Daniel; Filippis, Ioannis; Abbott, James; Dixit, Rekha; Singh, Manju; Singh, Archana; Pal, Jitendra Kumar; Pandit, Awadhesh; Singh, Pradeep Kumar; Mahato, Ajay Kumar; Dogra, Vivek; Gaikwad, Kishor; Sharma, Tilak Raj; Mohapatra, Trilochan; Singh, Nagendra Kumar; Causse, Mathilde; Rothan, Christophe; Schiex, Thomas; Noirot, Celine; Bellec, Arnaud; Klopp, Christophe; Delalande, Corinne; Berges, Helene; Mariette, Jerome; Frasse, Pierre; Vautrin, Sonia; Zouine, Mohamed; Latche, Alain; Rousseau, Christine; Regad, Farid; Pech, Jean-Claude; Philippot, Murielle; Bouzayen, Mondher; Pericard, Pierre; Osorio, Sonia; Fernandez del Carmen, Asuncion; Monforte, Antonio; Granell, Antonio; Fernandez-Munoz, Rafael; Conte, Mariana; Lichtenstein, Gabriel; Carrari, Fernando; De Bellis, Gianluca; Fuligni, Fabio; Peano, Clelia; Grandillo, Silvana; Termolino, Pasquale; Pietrella, Marco; Fantini, Elio; Falcone, Giulia; Fiore, Alessia; Giuliano, Giovanni; Lopez, Loredana; Facella, Paolo; Perrotta, Gaetano; Daddiego, Loretta; Bryan, Glenn; Orozco, Modesto; Pastor, Xavier; Torrents, David; van Schriek, Keygene N. V. Marco G. M.; Feron, Richard M. C.; van Oeveren, Jan; de Heer, Peter; daPonte, Lorena; Jacobs-Oomen, Saskia; Cariaso, Mike; Prins, Marcel; van Eijk, Michiel J. T.; Janssen, Antoine; van Haaren, Mark J. J.; Jo, Sung-Hwan; Kim, Jungeun; Kwon, Suk-Yoon; Kim, Sangmi; Koo, Dal-Hoe; Lee, Sanghyeob; Hur, Cheol-Goo; Clouser, Christopher; Rico, Alain; Hallab, Asis; Gebhardt, Christiane; Klee, Kathrin; Joecker, Anika; Warfsmann, Jens; Goebel, Ulrike; Kawamura, Shingo; Yano, Kentaro; Sherman, Jamie D.; Fukuoka, Hiroyuki; Negoro, Satomi; Bhutty, Sarita; Chowdhury, Parul; Chattopadhyay, Debasis; Datema, Erwin; Smit, Sandra; Schijlen, Eliog. W. M.; van de Belt, Jose; van Haarst, Jan C.; Peters, Sander A.; van Staveren, Marjo J.; Henkens, Marleen H. C.; Mooyman, Paul J. W.; Hesselink, Thamara; van Ham, Roeland C. H. J.; Jiang, Guoyong; Droege, Marcus; Choi, Doil; Kang, Byung-Cheol; Kim, Byung Dong; Park, Minkyu; Kim, Seungill; Yeom, Seon-In; Lee, Yong-Hwan; Choi, Yang-Do; Li, Guangcun; Gao, Jianwei; Liu, Yongsheng; Huang, Shengxiong; Fernandez-Pedrosa, Victoria; Collado, Carmen; Zuniga, Sheila; Wang, Guoping; Cade, Rebecca; Dietrich, Robert A.; Rogers, Jane; Knapp, Sandra; Fei, Zhangjun; White, Ruth A.; Thannhauser, Theodore W.; Giovannoni, James J.; Angel Botella, Miguel; Gilbert, Louise; Gonzalez, Ramon; Goicoechea, Jose Luis; Yu, Yeisoo; Kudrna, David; Collura, Kristi; Wissotski, Marina; Wing, Rod; Schoof, Heiko; Meyers, Blake C.; Gurazada, Aishwarya Bala; Green, Pamela J.; Mathur, Saloni; Vyas, Shailendra; Solanke, Amolkumar U.; Kumar, Rahul; Gupta, Vikrant; Sharma, Arun K.; Khurana, Paramjit; Khurana, Jitendra P.; Tyagi, Akhilesh K.; Dalmay, Tamas; Mohorianu, Irina; Walts, Brandon; Chamala, Srikar; Barbazuk, W. Brad; Li, Jingping; Guo, Hui; Lee, Tae-Ho; Wang, Yupeng; Zhang, Dong; Paterson, Andrew H.; Wang, Xiyin; Tang, Haibao; Barone, Amalia; Chiusano, Maria Luisa; Ercolano, Maria Raffaella; D'Agostino, Nunzio; Di Filippo, Miriam; Traini, Alessandra; Sanseverino, Walter; Frusciante, Luigi; Seymour, Graham B.; Elharam, Mounir; Fu, Ying; Hua, Axin; Kenton, Steven; Lewis, Jennifer; Lin, Shaoping; Najar, Fares; Lai, Hongshing; Qin, Baifang; Qu, Chunmei; Shi, Ruihua; White, Douglas; White, James; Xing, Yanbo; Yang, Keqin; Yi, Jing; Yao, Ziyun; Zhou, Liping; Roe, Bruce A.; Vezzi, Alessandro; D'Angelo, Michela; Zimbello, Rosanna; Schiavon, Riccardo; Caniato, Elisa; Rigobello, Chiara; Campagna, Davide; Vitulo, Nicola; Valle, Giorgio; Nelson, David R.; De Paoli, Emanuele; Szinay, Dora; de Jong, Hans H.; Bai, Yuling; Visser, Richard G. F.; Lankhorst, Rene M. Klein; Beasley, Helen; McLaren, Karen; Nicholson, Christine; Riddle, Claire; Gianese, Giulio
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| 发表日期 | 2012
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| ISSN | 0028-0836
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| EISSN | 1476-4687
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| 卷号 | 485期号:7400 |
| 英文摘要 | Tomato (Solanum lycopersicum) is a major crop plant and a model system for fruit development. Solanum is one of the largest angiosperm genera(1) and includes annual and perennial plants from diverse habitats. Here we present a high-quality genome sequence of domesticated tomato, a draft sequence of its closest wild relative, Solanum pimpinellifolium(2), and compare them to each other and to the potato genome (Solanum tuberosum). The two tomato genomes show only 0.6% nucleotide divergence and signs of recent admixture, but show more than 8% divergence from potato, with nine large and several smaller inversions. In contrast to Arabidopsis, but similar to soybean, tomato and potato small RNAs map predominantly to gene-rich chromosomal regions, including gene promoters. The Solanum lineage has experienced two consecutive genome triplications: one that is ancient and shared with rosids, and a more recent one. These triplications set the stage for the neofunctionalization of genes controlling fruit characteristics, such as colour and fleshiness. |
| 学科领域 | Science & Technology - Other Topics
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| 语种 | 英语
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| WOS研究方向 | Multidisciplinary Sciences
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| 来源期刊 | NATURE
 |
| 来源机构 | 中国科学院西北生态环境资源研究院
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| 文献类型 | 期刊论文
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| 条目标识符 | http://gcip.llas.ac.cn/handle/2XKMVOVA/111673
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| 作者单位 | Kazusa DNA Res Inst, 2-6-7 Kazusa Kamatari, Kisarazu, Chiba 2920818, Japan
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推荐引用方式
GB/T 7714 |
Sato, Shusei,Tabata, Satoshi,Hirakawa, Hideki,et al. The tomato genome sequence provides insights into fleshy fruit evolution[J]. 中国科学院西北生态环境资源研究院,2012,485(7400).
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| APA |
Sato, Shusei.,Tabata, Satoshi.,Hirakawa, Hideki.,Asamizu, Erika.,Shirasawa, Kenta.,...&Gianese, Giulio.(2012).The tomato genome sequence provides insights into fleshy fruit evolution.NATURE,485(7400).
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| MLA |
Sato, Shusei,et al."The tomato genome sequence provides insights into fleshy fruit evolution".NATURE 485.7400(2012).
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