CCPortal
DOI10.5705/ss.202017.0482
SPATIAL JOINT SPECIES DISTRIBUTION MODELING USING DIRICHLET PROCESSES
Shirota, Shinichiro1; Gelfand, Alan E.2; Banerjee, Sudipto1
发表日期2019
ISSN1017-0405
EISSN1996-8507
卷号29期号:3页码:1127-1154
英文摘要

Species distribution models usually attempt to explain the presence-absence or abundance of a species at a site in terms of the environmental features (so-called abiotic features) present at the site. Historically, such models have considered species individually. However, it is well established that species interact to influence the presence-absence and abundance (envisioned as biotic factors). As a result, recently joint species distribution models with various types of responses, such as presence-absence, continuous, and ordinal data have attracted a significant amount of interest. Such models incorporate the dependence between species' responses as a proxy for interaction. We address the accommodation of such modeling in the context of a large number of species (e.g., order 10(2)) across sites numbering in the order of 10(2) or 10(3) when, in practice, only a few species are found at any observed site. To do so, we adopt a dimension-reduction approach. The novelty of our approach is that we add spatial dependence. That is, we consider a collection of sites over a relatively small spatial region. As such, we anticipate that the species distribution at a given site will be similar to that at a nearby site. Specifically, we handle dimension reduction using Dirichlet processes, which enables the clustering of species, and add spatial dependence across sites using Gaussian processes. We use simulated data and a plant communities data set for the Cape Floristic Region (CFR) of South Africa to demonstrate our approach. The latter consists of presence-absence measurements for 639 tree species at 662 locations. These two examples demonstrate the improved predictive performance of our method using the aforementioned specification.


WOS研究方向Mathematics
来源期刊STATISTICA SINICA
文献类型期刊论文
条目标识符http://gcip.llas.ac.cn/handle/2XKMVOVA/99908
作者单位1.Univ Calif Los Angeles, Dept Biostat, 650 Charles E Young Dr, South Los Angeles, CA 90095 USA;
2.Duke Univ, Dept Stat, Durham, NC 27708 USA
推荐引用方式
GB/T 7714
Shirota, Shinichiro,Gelfand, Alan E.,Banerjee, Sudipto. SPATIAL JOINT SPECIES DISTRIBUTION MODELING USING DIRICHLET PROCESSES[J],2019,29(3):1127-1154.
APA Shirota, Shinichiro,Gelfand, Alan E.,&Banerjee, Sudipto.(2019).SPATIAL JOINT SPECIES DISTRIBUTION MODELING USING DIRICHLET PROCESSES.STATISTICA SINICA,29(3),1127-1154.
MLA Shirota, Shinichiro,et al."SPATIAL JOINT SPECIES DISTRIBUTION MODELING USING DIRICHLET PROCESSES".STATISTICA SINICA 29.3(2019):1127-1154.
条目包含的文件
条目无相关文件。
个性服务
推荐该条目
保存到收藏夹
导出为Endnote文件
谷歌学术
谷歌学术中相似的文章
[Shirota, Shinichiro]的文章
[Gelfand, Alan E.]的文章
[Banerjee, Sudipto]的文章
百度学术
百度学术中相似的文章
[Shirota, Shinichiro]的文章
[Gelfand, Alan E.]的文章
[Banerjee, Sudipto]的文章
必应学术
必应学术中相似的文章
[Shirota, Shinichiro]的文章
[Gelfand, Alan E.]的文章
[Banerjee, Sudipto]的文章
相关权益政策
暂无数据
收藏/分享

除非特别说明,本系统中所有内容都受版权保护,并保留所有权利。