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DOI10.1007/s12192-019-00996-y
Salinity stress-induced differentially expressed miRNAs and target genes in sea cucumbers Apostichopus japonicus
Tian, Yi; Shang, Yanpeng; Guo, Ran; Chang, Yaqing; Jiang, Yanan
发表日期2019
ISSN1355-8145
EISSN1466-1268
卷号24期号:4页码:719-733
英文摘要

Environmental salinity is an important abiotic factor influencing normal physiological functions and productive performance in the sea cucumber Apostichopus japonicus. It is therefore important to understand how changes in salinity affect sea cucumbers in the face of global climate change. In this study, we investigated the responses to salinity stress in sea cucumbers using mRNA and miRNA sequencing. The regulatory network of mRNAs and miRNAs involved in salinity stress was examined, and the metabolic pathways enriched for differentially expressed miRNAs and target mRNAs were identified. The top 20 pathways were involved in carbohydrate metabolism, fatty acid metabolism, degradation, and elongation, amino acid metabolism, genetic information processing, metabolism of cofactors and vitamins, transport and catabolism, and environmental information processing. A total of 22 miRNAs showed differential expression during salinity acclimation. The predicted 134 target genes were enriched in functions consistent with the results of gene enrichment based on transcriptome analysis. These results suggested that sea cucumbers deal with salinity stress via changes in amino acid metabolism, ion channels, transporters, and aquaporins, under stimulation by environmental signals, and that this process requires energy from carbohydrate and fatty acid metabolism. Salinity challenge also induced miRNA expression. These results provide a valuable genomic resource that extends our understanding of the unique biological characteristics of this economically important species under conditions of salinity stress.


WOS研究方向Cell Biology
来源期刊CELL STRESS & CHAPERONES
文献类型期刊论文
条目标识符http://gcip.llas.ac.cn/handle/2XKMVOVA/99454
作者单位Dalian Ocean Univ, Key Lab Mariculture & Stock Enhancement North Chi, Minist Agr, Heishijiao St 52, Dalian 116023, Peoples R China
推荐引用方式
GB/T 7714
Tian, Yi,Shang, Yanpeng,Guo, Ran,et al. Salinity stress-induced differentially expressed miRNAs and target genes in sea cucumbers Apostichopus japonicus[J],2019,24(4):719-733.
APA Tian, Yi,Shang, Yanpeng,Guo, Ran,Chang, Yaqing,&Jiang, Yanan.(2019).Salinity stress-induced differentially expressed miRNAs and target genes in sea cucumbers Apostichopus japonicus.CELL STRESS & CHAPERONES,24(4),719-733.
MLA Tian, Yi,et al."Salinity stress-induced differentially expressed miRNAs and target genes in sea cucumbers Apostichopus japonicus".CELL STRESS & CHAPERONES 24.4(2019):719-733.
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