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DOI10.1111/eva.12799
Divergent transcriptomic signatures in response to salinity exposure in two populations of an estuarine fish
Jeffries, Ken M.1,2,3; Connon, Richard E.2; Verhille, Christine E.3,5; Dabruzzi, Theresa F.3,6; Britton, Monica T.4; Durbin-Johnson, Blythe P.4; Fangue, Nann A.3
发表日期2019
ISSN1752-4571
卷号12期号:6页码:1212-1226
英文摘要

In estuary and coastal systems, human demand for freshwater, climate change-driven precipitation variability, and extreme weather impact salinity levels, reducing connectivity between mesohaline coastal fish populations and potentially contributing to genomic divergence. We examined gill transcriptome responses to salinity in wild-caught juveniles from two populations of Sacramento splittail (Pogonichthys macrolepidotus), a species of conservation concern that is endemic to the San Francisco Estuary, USA, and the lower reaches of its tributaries. Recent extreme droughts have led to salinities above the tolerance limits for this species, creating a migration barrier between these populations, which potentially contributed to population divergence. We identified transcripts involved in a conserved response to salinity; however, the more salinity-tolerant San Pablo population had greater transcriptome plasticity (3.6-fold more transcripts responded than the Central Valley population) and a response consistent with gill remodeling after 168 hr of exposure to elevated salinity. The reorganization of the gill in response to changing osmotic gradients is a process critical for acclimation and would facilitate enhanced salinity tolerance. We detected an upregulation of receptors that control the Wnt (wingless-type) cell signaling pathway that may be required for an adaptive response to increases in salinity, patterns not observed in the relatively salinity-sensitive Central Valley population. We detected 62 single nucleotide polymorphisms (SNPs) in coding regions of 26 transcripts that differed between the populations. Eight transcripts that contained SNPs were associated with immune responses, highlighting the importance of diversity in immune gene sequences as a defining characteristic of genomic divergence between these populations. Our data demonstrate that these populations have divergent transcriptomic responses to salinity, which is consistent with observed physiological differences in salinity tolerance.


WOS研究方向Evolutionary Biology
来源期刊EVOLUTIONARY APPLICATIONS
文献类型期刊论文
条目标识符http://gcip.llas.ac.cn/handle/2XKMVOVA/98476
作者单位1.Univ Manitoba, Dept Biol Sci, Winnipeg, MB, Canada;
2.Univ Calif Davis, Sch Vet Med, Anat Physiol & Cell Biol, One Shields Ave, Davis, CA 95616 USA;
3.Univ Calif Davis, Wildlife Fish & Conservat Biol, Davis, CA 95616 USA;
4.Univ Calif Davis, Bioinformat Core Facil, Genome Ctr, Davis, CA 95616 USA;
5.Montana State Univ, Dept Ecol, Bozeman, MT 59717 USA;
6.St Anselm Coll, Biol Dept, Manchester, NH USA
推荐引用方式
GB/T 7714
Jeffries, Ken M.,Connon, Richard E.,Verhille, Christine E.,et al. Divergent transcriptomic signatures in response to salinity exposure in two populations of an estuarine fish[J],2019,12(6):1212-1226.
APA Jeffries, Ken M..,Connon, Richard E..,Verhille, Christine E..,Dabruzzi, Theresa F..,Britton, Monica T..,...&Fangue, Nann A..(2019).Divergent transcriptomic signatures in response to salinity exposure in two populations of an estuarine fish.EVOLUTIONARY APPLICATIONS,12(6),1212-1226.
MLA Jeffries, Ken M.,et al."Divergent transcriptomic signatures in response to salinity exposure in two populations of an estuarine fish".EVOLUTIONARY APPLICATIONS 12.6(2019):1212-1226.
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