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DOI10.1016/j.envexpbot.2019.02.005
Discovery of unique single nucleotide polymorphisms in rice in response to high nighttime temperature stress using a hybrid sequencing strategy
Zhou, Hui-Wen1,3; Zhang, Hong-Yu1; Wang, Zhao-Hai1; He, Chao1; You, Li-Li1; Fu, Dong-Hui1; Song, Jian-Bo1; Huang, Ying-Jin1,2; Liao, Jiang-Lin1,2
发表日期2019
ISSN0098-8472
EISSN1873-7307
卷号162页码:48-57
英文摘要

Global warming-associated increases in temperature, particularly at nighttime, are detrimental to rice grain filling, ultimately leading to losses in grain weight. However, the molecular mechanisms associated with grain weight loss in rice exposed to high nighttime temperature stress are poorly understood. To screen the genes and single nucleotide polymorphisms (SNPs) associated with high nighttime temperature stress in rice, a hybrid sequencing strategy was used to analyze the differentially expressed genes and SNPs between two rice coisogenic strains, a heat-tolerant strain (HTS) and heat-sensitive strain (HSS), following short-term extreme high nighttime temperature stress at the first stage of seed ripening. Ultimately, 56 genes were differentially expressed between HTS and HSS. After short-term extreme high nighttime temperature stress, genes involved in photosynthesis, oxidation, and detoxication by glutathione were upregulated in HSS in comparison to HTS, while that of the heat response-related transcription factor genes were significantly upregulated in HTS in comparison to HSS. Unique SNPs located on the genes peroxidase precursor, glutathione S-transferase GSTU6, glycosyl hydrolases, carboxyvinylcarboxyphosphonate phosphorylmutase, and prolamin precursor PROLM3 were present in HTS but absent from HSS and showed slight alterations in gene expression between HTS and HSS. The proposed model indicated that high nighttime temperature enhanced cellular respiration, disturbed the oxidant-antioxidant balance, and consumed energy-rich substances, ultimately leading to reduced grain yield in HSS in contrast to HTS. These genes and unique SNPs provide genetic resources for the breeding of heat-tolerant rice varieties, and the model provides insights into the molecular basis of the response of rice to high nighttime temperature stress.


WOS研究方向Plant Sciences ; Environmental Sciences & Ecology
来源期刊ENVIRONMENTAL AND EXPERIMENTAL BOTANY
文献类型期刊论文
条目标识符http://gcip.llas.ac.cn/handle/2XKMVOVA/98468
作者单位1.Jiangxi Agr Univ, Minist Educ China, Key Lab Crop Physiol Ecol & Genet Breeding, Nanchang 330045, Jiangxi, Peoples R China;
2.Southern Reg Collaborat Innovat Ctr Grain & Oil C, Changsha 410128, Hunan, Peoples R China;
3.Jiujiang Univ, Coll Pharm & Life Sci, Jiujiang City 332005, Jiangxi, Peoples R China
推荐引用方式
GB/T 7714
Zhou, Hui-Wen,Zhang, Hong-Yu,Wang, Zhao-Hai,et al. Discovery of unique single nucleotide polymorphisms in rice in response to high nighttime temperature stress using a hybrid sequencing strategy[J],2019,162:48-57.
APA Zhou, Hui-Wen.,Zhang, Hong-Yu.,Wang, Zhao-Hai.,He, Chao.,You, Li-Li.,...&Liao, Jiang-Lin.(2019).Discovery of unique single nucleotide polymorphisms in rice in response to high nighttime temperature stress using a hybrid sequencing strategy.ENVIRONMENTAL AND EXPERIMENTAL BOTANY,162,48-57.
MLA Zhou, Hui-Wen,et al."Discovery of unique single nucleotide polymorphisms in rice in response to high nighttime temperature stress using a hybrid sequencing strategy".ENVIRONMENTAL AND EXPERIMENTAL BOTANY 162(2019):48-57.
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