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DOI10.3390/biology8020021
Transcriptome Analysis of Yamame (Oncorhynchus masou) in Normal Conditions after Heat Stress
Kraitavin, Waraporn1; Yoshitake, Kazutoshi1; Igarashi, Yoji1; Mitsuyama, Susumu1; Kinoshita, Shigeharu1; Kambayashi, Daisuke2; Watabe, Shugo3; Asakawa, Shuichi1
发表日期2019
EISSN2079-7737
卷号8期号:2
英文摘要

Understanding the mechanism of high-temperature tolerance in cold-freshwater fish is crucial for predicting how certain species will cope with global warming. In this study, we investigated temperature tolerance in masu salmon (Oncorhynchus masou, known in Japan as yamame'), an important aquaculture species. By selective breeding, we developed a group of yamame (F2) with high-temperature tolerance. This group was subjected to a high-temperature tolerance test and divided into two groups: High-temperature tolerant (HT) and non-high-temperature tolerant (NT). RNA was extracted from the gill and adipose fin tissues of each group, and the mRNA expression profiles were analyzed using RNA sequencing. A total of 2893 differentially expressed genes (DEGs) from the gill and 836 from the adipose fin were identified by comparing the HT and NT groups. Functional analyses were then performed to identify associated gene ontology (GO) terms and the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways. The HT group showed a high expression of heat shock protein 70 (HSP70) gene and enriched gene expression in the extracellular matrix (ECM), cell junction, and adhesion pathways in gill tissues compared to the NT group. The HT group also exhibited highly expressed genes in glycolysis and showed lower expression of the genes in the p53 signaling pathway in adipose fin tissues. Taken together, the difference of expression of some genes in the normal condition may be responsible for the difference in heat tolerance between the HT and NT yamame in the heat stress condition.


WOS研究方向Life Sciences & Biomedicine - Other Topics
来源期刊BIOLOGY-BASEL
文献类型期刊论文
条目标识符http://gcip.llas.ac.cn/handle/2XKMVOVA/98303
作者单位1.Univ Tokyo, Grad Sch Agr & Life Sci, Bunkyo Ku, Tokyo 1138657, Japan;
2.Miyazaki Prefectural Fisheries Res Inst, Kobayashi Branch, Kobayashi, Miyazaki 8860005, Japan;
3.Kitasato Univ, Sch Marine Biosci, Minami Ku, Sagamihara, Kanagawa 2520313, Japan
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Kraitavin, Waraporn,Yoshitake, Kazutoshi,Igarashi, Yoji,et al. Transcriptome Analysis of Yamame (Oncorhynchus masou) in Normal Conditions after Heat Stress[J],2019,8(2).
APA Kraitavin, Waraporn.,Yoshitake, Kazutoshi.,Igarashi, Yoji.,Mitsuyama, Susumu.,Kinoshita, Shigeharu.,...&Asakawa, Shuichi.(2019).Transcriptome Analysis of Yamame (Oncorhynchus masou) in Normal Conditions after Heat Stress.BIOLOGY-BASEL,8(2).
MLA Kraitavin, Waraporn,et al."Transcriptome Analysis of Yamame (Oncorhynchus masou) in Normal Conditions after Heat Stress".BIOLOGY-BASEL 8.2(2019).
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