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DOI | 10.3390/biology8020021 |
Transcriptome Analysis of Yamame (Oncorhynchus masou) in Normal Conditions after Heat Stress | |
Kraitavin, Waraporn1; Yoshitake, Kazutoshi1; Igarashi, Yoji1; Mitsuyama, Susumu1; Kinoshita, Shigeharu1; Kambayashi, Daisuke2; Watabe, Shugo3; Asakawa, Shuichi1 | |
发表日期 | 2019 |
EISSN | 2079-7737 |
卷号 | 8期号:2 |
英文摘要 | Understanding the mechanism of high-temperature tolerance in cold-freshwater fish is crucial for predicting how certain species will cope with global warming. In this study, we investigated temperature tolerance in masu salmon (Oncorhynchus masou, known in Japan as yamame'), an important aquaculture species. By selective breeding, we developed a group of yamame (F2) with high-temperature tolerance. This group was subjected to a high-temperature tolerance test and divided into two groups: High-temperature tolerant (HT) and non-high-temperature tolerant (NT). RNA was extracted from the gill and adipose fin tissues of each group, and the mRNA expression profiles were analyzed using RNA sequencing. A total of 2893 differentially expressed genes (DEGs) from the gill and 836 from the adipose fin were identified by comparing the HT and NT groups. Functional analyses were then performed to identify associated gene ontology (GO) terms and the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways. The HT group showed a high expression of heat shock protein 70 (HSP70) gene and enriched gene expression in the extracellular matrix (ECM), cell junction, and adhesion pathways in gill tissues compared to the NT group. The HT group also exhibited highly expressed genes in glycolysis and showed lower expression of the genes in the p53 signaling pathway in adipose fin tissues. Taken together, the difference of expression of some genes in the normal condition may be responsible for the difference in heat tolerance between the HT and NT yamame in the heat stress condition. |
WOS研究方向 | Life Sciences & Biomedicine - Other Topics |
来源期刊 | BIOLOGY-BASEL
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文献类型 | 期刊论文 |
条目标识符 | http://gcip.llas.ac.cn/handle/2XKMVOVA/98303 |
作者单位 | 1.Univ Tokyo, Grad Sch Agr & Life Sci, Bunkyo Ku, Tokyo 1138657, Japan; 2.Miyazaki Prefectural Fisheries Res Inst, Kobayashi Branch, Kobayashi, Miyazaki 8860005, Japan; 3.Kitasato Univ, Sch Marine Biosci, Minami Ku, Sagamihara, Kanagawa 2520313, Japan |
推荐引用方式 GB/T 7714 | Kraitavin, Waraporn,Yoshitake, Kazutoshi,Igarashi, Yoji,et al. Transcriptome Analysis of Yamame (Oncorhynchus masou) in Normal Conditions after Heat Stress[J],2019,8(2). |
APA | Kraitavin, Waraporn.,Yoshitake, Kazutoshi.,Igarashi, Yoji.,Mitsuyama, Susumu.,Kinoshita, Shigeharu.,...&Asakawa, Shuichi.(2019).Transcriptome Analysis of Yamame (Oncorhynchus masou) in Normal Conditions after Heat Stress.BIOLOGY-BASEL,8(2). |
MLA | Kraitavin, Waraporn,et al."Transcriptome Analysis of Yamame (Oncorhynchus masou) in Normal Conditions after Heat Stress".BIOLOGY-BASEL 8.2(2019). |
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