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On Earth, chemical weathering of basaltic rocks not only modulates the climate change, but also plays a crucial role on the ocean oxygenation and ecosystem evolution. Records of paleo-weathered crusts are a challenge to identify because they are obscured by subsequent alteration processes and buried by the newly formed volcanic lavas. However, late formed volcanic rocks theoretically could record previously weathered crust via their assimilation and fractional crystallization (AFC) processes. Here, we present a systematic study on major, trace elements and Sr-Nd-Mg isotopes in a suite of Changbaishan early formed basalts and late erupted trachytes from Northeast China. Detailed evidence of field observation, geochemical signature and rhyolite-MELTS simulations suggest that trachytes mainly originated from deep fractional crystallization of basaltic melts. The low abundant trachytes from the stratigraphic layer above the basalts display decoupled Mg-Sr and Nd isotopes. delta Mg-26 and Sr-87/Sr-86 in trachytes range from - 0.27 up to + 0.94 parts per thousand (the heaviest isotopic composition ever reported for Mg in the igneous rocks) and 0.70490 to 0.71065, respectively, which are significantly elevated relative to that of their mantle source. However, they preserved mantle source-like Nd-143/Nd-144 (0.512584 to 0.512656) ratios. These unusual characteristics cannot be explained by thermal diffusion, fractional crystallization or simple crustal contamination processes. Specifically, delta Mg-26 correlates positively with SiO2 and Sr-87/Sr-86, and negatively with MgO, CaO, Al2O3, Sr and Nb/U indicators. The highly elevated Mg and Sr isotopes but limited Nd isotopic changes in trachytes require a component to be the relatively younger weathering residue of basaltic rocks. Taking this component as a wall rock endmember, the well-developed above correlations can be best modelled by AFC processes. This reflects that some trachytes in the aftermath of AFC processes almost fully lost their primary source characteristics, but inherited the intense chemical weathering signature of basalts. This event probably occurred in the middle Miocene as studies of paleosols showed humid and warm climate during that period after the initial eruption of Changbaishan basalts. Therefore, our study as a specific case for the first time provides an efficient way to explore paleo-weathering of basaltic crusts buried in the Earths surface, through comprehensive investigating Mg, Sr and Nd isotopes of volcanic rocks developed in the late stage of a volcano cone.