Climate Change Data Portal
DOI | 10.1016/j.envsoft.2018.09.004 |
An R package facilitating sensitivity analysis, calibration and forward simulations with the LPJ-GUESS dynamic vegetation model | |
Bagnara, Maurizio1,2; Gonzalez, Ramiro Silveyra1,3; Reifenberg, Stefan4; Steinkamp, Joerg2; Hickler, Thomas2,5; Werner, Christian2; Dormann, Carsten F.1; Hartig, Florian1,6 | |
发表日期 | 2019 |
ISSN | 1364-8152 |
EISSN | 1873-6726 |
卷号 | 111页码:55-60 |
英文摘要 | Dynamic global vegetation models (DGVMs) are of crucial importance for understanding and predicting vegetation, carbon, nitrogen and water dynamics of ecosystems in response to climate change. Their complexity, however, creates challenges for model analysis and data integration. A solution is to interface DGVMs with established statistical computing environments. Here we introduce rLPJGUESS, an R-package that couples the widely used DGVM LPJ-GUESS with the R environment for statistical computing, making existing R-packages and functions readily available to perform complex analyses with this model. We demonstrate the advantages of this framework by using rLPJGUESS to perform several otherwise laborious tasks: first, a set of single simulations, followed by global and local sensitivity analyses, a Bayesian calibration with a Markov-Chain Monte Carlo (MCMC) algorithm, and a predictive simulation with multiple climate scenarios. Our example highlights the opportunities of interfacing existing models in earth and environmental sciences with state-of-the-art computing environments such as R. |
WOS研究方向 | Computer Science ; Engineering ; Environmental Sciences & Ecology |
来源期刊 | ENVIRONMENTAL MODELLING & SOFTWARE
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文献类型 | 期刊论文 |
条目标识符 | http://gcip.llas.ac.cn/handle/2XKMVOVA/91798 |
作者单位 | 1.Univ Freiburg, Dept Biometry & Environm Syst Anal, Tennenbacher Str 4, D-79106 Freiburg, Germany; 2.Senckenberg Biodivers & Climate Res Ctr BiK F, Senckenberganlage 25, D-60325 Frankfurt, Germany; 3.Leibniz Assoc, Potsdam Inst Climate Impact Res, POB 601203, D-14412 Potsdam, Germany; 4.Univ Freiburg, Chair Forestry Econ & Forest Planning, Tennenbacher Str 4, D-79106 Freiburg, Germany; 5.Goethe Univ, Geosci, Dept Phys Geog, Altenhoferallee 1, D-60438 Frankfurt, Germany; 6.Univ Regensburg, Fac Biol & Preclin Med, Theoret Ecol, Univ Str 3, D-93053 Regensburg, Germany |
推荐引用方式 GB/T 7714 | Bagnara, Maurizio,Gonzalez, Ramiro Silveyra,Reifenberg, Stefan,et al. An R package facilitating sensitivity analysis, calibration and forward simulations with the LPJ-GUESS dynamic vegetation model[J],2019,111:55-60. |
APA | Bagnara, Maurizio.,Gonzalez, Ramiro Silveyra.,Reifenberg, Stefan.,Steinkamp, Joerg.,Hickler, Thomas.,...&Hartig, Florian.(2019).An R package facilitating sensitivity analysis, calibration and forward simulations with the LPJ-GUESS dynamic vegetation model.ENVIRONMENTAL MODELLING & SOFTWARE,111,55-60. |
MLA | Bagnara, Maurizio,et al."An R package facilitating sensitivity analysis, calibration and forward simulations with the LPJ-GUESS dynamic vegetation model".ENVIRONMENTAL MODELLING & SOFTWARE 111(2019):55-60. |
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