CCPortal
DOI10.1093/bioinformatics/btw680
tcpl: the ToxCast pipeline for high- throughput screening data
Filer, Dayne L.; Kothiya, Parth; Setzer, R. Woodrow; Judson, Richard S.; Martin, Matthew T.
发表日期2017-02-15
ISSN1367-4803
卷号33期号:4页码:618-620
英文摘要

Motivation: Large high-throughput screening (HTS) efforts are widely used in drug development and chemical toxicity screening. Wide use and integration of these data can benefit from an efficient, transparent and reproducible data pipeline. Summary: The tcpl R package and its associated MySQL database provide a generalized platform for efficiently storing, normalizing and doseresponse modeling of large high-throughput and high-content chemical screening data. The novel dose-response modeling algorithm has been tested against millions of diverse dose-response series, and robustly fits data with outliers and cytotoxicity-related signal loss.


语种英语
WOS记录号WOS:000397264100037
来源期刊BIOINFORMATICS
来源机构美国环保署
文献类型期刊论文
条目标识符http://gcip.llas.ac.cn/handle/2XKMVOVA/62490
作者单位US EPA, Natl Ctr Computat Toxicol, Res Triangle Pk, NC 27711 USA
推荐引用方式
GB/T 7714
Filer, Dayne L.,Kothiya, Parth,Setzer, R. Woodrow,et al. tcpl: the ToxCast pipeline for high- throughput screening data[J]. 美国环保署,2017,33(4):618-620.
APA Filer, Dayne L.,Kothiya, Parth,Setzer, R. Woodrow,Judson, Richard S.,&Martin, Matthew T..(2017).tcpl: the ToxCast pipeline for high- throughput screening data.BIOINFORMATICS,33(4),618-620.
MLA Filer, Dayne L.,et al."tcpl: the ToxCast pipeline for high- throughput screening data".BIOINFORMATICS 33.4(2017):618-620.
条目包含的文件
条目无相关文件。
个性服务
推荐该条目
保存到收藏夹
导出为Endnote文件
谷歌学术
谷歌学术中相似的文章
[Filer, Dayne L.]的文章
[Kothiya, Parth]的文章
[Setzer, R. Woodrow]的文章
百度学术
百度学术中相似的文章
[Filer, Dayne L.]的文章
[Kothiya, Parth]的文章
[Setzer, R. Woodrow]的文章
必应学术
必应学术中相似的文章
[Filer, Dayne L.]的文章
[Kothiya, Parth]的文章
[Setzer, R. Woodrow]的文章
相关权益政策
暂无数据
收藏/分享

除非特别说明,本系统中所有内容都受版权保护,并保留所有权利。