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DOI | 10.3389/fimmu.2017.00612 |
Nature and Consequences of Biological Reductionism for the Immunological Study of Infectious Diseases | |
Rivas, Ariel L.1; Leitner, Gabriel2; Jankowski, Mark D.3,4; Hoogesteijn, Almira L.5; Iandiorio, Michelle J.6; Chatzipanagiotou, Stylianos7; Ioannidis, Anastasios8; Blum, Shlomo E.2; Piccinini, Renata9; Antoniades, Athos10; Fazio, Jane C.6; Apidianakis, Yiorgos11; Fair, Jeanne M.12; Van Regenmortel, Marc H. V.13 | |
发表日期 | 2017-05-31 |
ISSN | 1664-3224 |
卷号 | 8 |
英文摘要 | Evolution has conserved "economic" systems that perform many functions, faster or better, with less. For example, three to five leukocyte types protect from thousands of pathogens. To achieve so much with so little, biological systems combine their limited elements, creating complex structures. Yet, the prevalent research paradigm is reductionist. Focusing on infectious diseases, reductionist and non-reductionist views are here described. The literature indicates that reductionism is associated with information loss and errors, while non-reductionist operations can extract more information from the same data. When designed to capture one-to-many/many-to-one interactions-including the use of arrows that connect pairs of consecutive observations-non-reductionist (spatial-temporal) constructs eliminate data variability from all dimensions, except along one line, while arrows describe the directionality of temporal changes that occur along the line. To validate the patterns detected by non-reductionist operations, reductionist procedures are needed. Integrated (non-reductionist and reductionist) methods can (i) distinguish data subsets that differ immunologically and statistically; (ii) differentiate false-negative from -positive errors; (iii) discriminate disease stages; (iv) capture in vivo, multilevel interactions that consider the patient, the microbe, and antibiotic-mediated responses; and (v) assess dynamics. Integrated methods provide repeatable and biologically interpretable information. |
英文关键词 | methods;host-microbe interactions;reductionism;non-reductionism;pattern recognition |
语种 | 英语 |
WOS记录号 | WOS:000402337500001 |
来源期刊 | FRONTIERS IN IMMUNOLOGY
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来源机构 | 美国环保署 |
文献类型 | 期刊论文 |
条目标识符 | http://gcip.llas.ac.cn/handle/2XKMVOVA/61807 |
作者单位 | 1.Univ New Mexico, Ctr Global Hlth, Sch Med, Div Infect Dis, Albuquerque, NM 87131 USA; 2.Kimron Vet Inst, Natl Mastitis Ctr, Bet Dagan, Israel; 3.US EPA, Environm Assessment, Seattle, WA USA; 4.Michigan State Univ, Dept Fisheries & Wildlife, E Lansing, MI 48824 USA; 5.CINVESTAV, Human Ecol, Mexico City, DF, Mexico; 6.Univ New Mexico, Sch Med, Dept Internal Med, Albuquerque, NM 87131 USA; 7.Univ Athens, Aeginit Hosp, Med Sch, Dept Biopathol & Clin Microbiol, Athens, Greece; 8.Univ Peloponnese, Fac Human Movement & Qual Life Sci, Dept Nursing, Tripoli, Sparta, Greece; 9.Univ Milan, Dept Vet Med, Milan, Italy; 10.Univ Cyprus, Dept Comp Sci, Nicosia, Cyprus; 11.Univ Cyprus, Dept Biol Sci, Nicosia, Cyprus; 12.Los Alamos Natl Lab Biosecur & Publ Hlth, Los Alamos, NM USA; 13.Univ Strasbourg, CNRS, Sch Biotechnol, Strasbourg, France |
推荐引用方式 GB/T 7714 | Rivas, Ariel L.,Leitner, Gabriel,Jankowski, Mark D.,et al. Nature and Consequences of Biological Reductionism for the Immunological Study of Infectious Diseases[J]. 美国环保署,2017,8. |
APA | Rivas, Ariel L..,Leitner, Gabriel.,Jankowski, Mark D..,Hoogesteijn, Almira L..,Iandiorio, Michelle J..,...&Van Regenmortel, Marc H. V..(2017).Nature and Consequences of Biological Reductionism for the Immunological Study of Infectious Diseases.FRONTIERS IN IMMUNOLOGY,8. |
MLA | Rivas, Ariel L.,et al."Nature and Consequences of Biological Reductionism for the Immunological Study of Infectious Diseases".FRONTIERS IN IMMUNOLOGY 8(2017). |
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