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DOI | 10.1021/acs.jcim.7b00194 |
Pred-Skin: A Fast and Reliable Web Application to Assess Skin Sensitization Effect of Chemicals | |
Braga, Rodolpho C.1; Alves, Vinicius M.1,2; Muratov, Eugene N.2,3; Strickland, Judy4; Kleinstreuer, Nicole5; Trospsha, Alexander2; Andrade, Carolina Horta1 | |
发表日期 | 2017-05-01 |
ISSN | 1549-9596 |
卷号 | 57期号:5页码:1013-1017 |
英文摘要 | Chemically induced skin sensitization is a complex immunological disease with a profound impact on quality of life and working ability. Despite some progress in developing alternative methods for assessing the skin sensitization potential of chemical substances, there is no in vitro test that correlates well with human data. Computational QSAR models provide a rapid screening approach and contribute valuable information for the assessment of chemical toxicity. We describe the development of a freely accessible web-based and mobile application for the identification of potential skin sensitizers. The application is based on previously developed binary QSAR models of skin sensitization potential from human (109 compounds) and murine local lymph node assay (LLNA, 515 compounds) data with good external correct classification rate (0.70-0.81 and 0.72-0.84, respectively). We also included a multiclass skin sensitization potency model based on LLNA data (accuracy ranging between 0.73 and 0.76). When a user evaluates a compound in the web app, the outputs are (i) binary predictions of human and murine skin sensitization potential; (ii) multiclass prediction of murine skin sensitization; and (iii) probability maps illustrating the predicted contribution of chemical fragments. The app is the first tool available that incorporates quantitative structure activity relationship (QSAR) models based on human data as well as multiclass models for LLNA. The Pred-Skin web app version 1.0 is freely available for the web, iOS, and Android (in development) at the LabMol web portal (http://labmol.com.br/predskin/), in the Apple Store, and on Google Play, respectively. We will continuously update the app as new skin sensitization data and respective models become available. |
语种 | 英语 |
WOS记录号 | WOS:000402019700001 |
来源期刊 | JOURNAL OF CHEMICAL INFORMATION AND MODELING
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来源机构 | 美国环保署 |
文献类型 | 期刊论文 |
条目标识符 | http://gcip.llas.ac.cn/handle/2XKMVOVA/61281 |
作者单位 | 1.Univ Fed Goias, Lab Mol Modeling & Drug Design, Fac Pharm, BR-74605170 Goiania, Go, Brazil; 2.Univ N Carolina, UNC Eshelman Sch Pharm, Div Chem Biol & Med Chem, Lab Mol Modeling, Chapel Hill, NC 27599 USA; 3.Odessa Natl Polytech Univ, Dept Chem Technol, UA-65000 Odessa, Ukraine; 4.Integrated Lab Syst Inc, POB 13501, Res Triangle Pk, NC 27709 USA; 5.Natl Inst Environm Hlth Sci, Interagency Ctr Evaluat Alternat Toxicol Methods, Natl Toxicol Program, Res Triangle Pk, NC 27709 USA |
推荐引用方式 GB/T 7714 | Braga, Rodolpho C.,Alves, Vinicius M.,Muratov, Eugene N.,et al. Pred-Skin: A Fast and Reliable Web Application to Assess Skin Sensitization Effect of Chemicals[J]. 美国环保署,2017,57(5):1013-1017. |
APA | Braga, Rodolpho C..,Alves, Vinicius M..,Muratov, Eugene N..,Strickland, Judy.,Kleinstreuer, Nicole.,...&Andrade, Carolina Horta.(2017).Pred-Skin: A Fast and Reliable Web Application to Assess Skin Sensitization Effect of Chemicals.JOURNAL OF CHEMICAL INFORMATION AND MODELING,57(5),1013-1017. |
MLA | Braga, Rodolpho C.,et al."Pred-Skin: A Fast and Reliable Web Application to Assess Skin Sensitization Effect of Chemicals".JOURNAL OF CHEMICAL INFORMATION AND MODELING 57.5(2017):1013-1017. |
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