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DOI10.1021/acs.jcim.7b00194
Pred-Skin: A Fast and Reliable Web Application to Assess Skin Sensitization Effect of Chemicals
Braga, Rodolpho C.1; Alves, Vinicius M.1,2; Muratov, Eugene N.2,3; Strickland, Judy4; Kleinstreuer, Nicole5; Trospsha, Alexander2; Andrade, Carolina Horta1
发表日期2017-05-01
ISSN1549-9596
卷号57期号:5页码:1013-1017
英文摘要

Chemically induced skin sensitization is a complex immunological disease with a profound impact on quality of life and working ability. Despite some progress in developing alternative methods for assessing the skin sensitization potential of chemical substances, there is no in vitro test that correlates well with human data. Computational QSAR models provide a rapid screening approach and contribute valuable information for the assessment of chemical toxicity. We describe the development of a freely accessible web-based and mobile application for the identification of potential skin sensitizers. The application is based on previously developed binary QSAR models of skin sensitization potential from human (109 compounds) and murine local lymph node assay (LLNA, 515 compounds) data with good external correct classification rate (0.70-0.81 and 0.72-0.84, respectively). We also included a multiclass skin sensitization potency model based on LLNA data (accuracy ranging between 0.73 and 0.76). When a user evaluates a compound in the web app, the outputs are (i) binary predictions of human and murine skin sensitization potential; (ii) multiclass prediction of murine skin sensitization; and (iii) probability maps illustrating the predicted contribution of chemical fragments. The app is the first tool available that incorporates quantitative structure activity relationship (QSAR) models based on human data as well as multiclass models for LLNA. The Pred-Skin web app version 1.0 is freely available for the web, iOS, and Android (in development) at the LabMol web portal (http://labmol.com.br/predskin/), in the Apple Store, and on Google Play, respectively. We will continuously update the app as new skin sensitization data and respective models become available.


语种英语
WOS记录号WOS:000402019700001
来源期刊JOURNAL OF CHEMICAL INFORMATION AND MODELING
来源机构美国环保署
文献类型期刊论文
条目标识符http://gcip.llas.ac.cn/handle/2XKMVOVA/61281
作者单位1.Univ Fed Goias, Lab Mol Modeling & Drug Design, Fac Pharm, BR-74605170 Goiania, Go, Brazil;
2.Univ N Carolina, UNC Eshelman Sch Pharm, Div Chem Biol & Med Chem, Lab Mol Modeling, Chapel Hill, NC 27599 USA;
3.Odessa Natl Polytech Univ, Dept Chem Technol, UA-65000 Odessa, Ukraine;
4.Integrated Lab Syst Inc, POB 13501, Res Triangle Pk, NC 27709 USA;
5.Natl Inst Environm Hlth Sci, Interagency Ctr Evaluat Alternat Toxicol Methods, Natl Toxicol Program, Res Triangle Pk, NC 27709 USA
推荐引用方式
GB/T 7714
Braga, Rodolpho C.,Alves, Vinicius M.,Muratov, Eugene N.,et al. Pred-Skin: A Fast and Reliable Web Application to Assess Skin Sensitization Effect of Chemicals[J]. 美国环保署,2017,57(5):1013-1017.
APA Braga, Rodolpho C..,Alves, Vinicius M..,Muratov, Eugene N..,Strickland, Judy.,Kleinstreuer, Nicole.,...&Andrade, Carolina Horta.(2017).Pred-Skin: A Fast and Reliable Web Application to Assess Skin Sensitization Effect of Chemicals.JOURNAL OF CHEMICAL INFORMATION AND MODELING,57(5),1013-1017.
MLA Braga, Rodolpho C.,et al."Pred-Skin: A Fast and Reliable Web Application to Assess Skin Sensitization Effect of Chemicals".JOURNAL OF CHEMICAL INFORMATION AND MODELING 57.5(2017):1013-1017.
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