CCPortal
DOI10.1002/etc.3002
Omics for aquatic ecotoxicology: Control of extraneous variability to enhance the analysis of environmental effects
Simmons, Denina B. D.1; Benskin, Jonathan P.2; Cosgrove, John R.2; Duncker, Bernard P.3; Ekman, Drew R.4; Martyniuk, Christopher J.5,6; Sherry, James P.1
发表日期2015-08-01
ISSN0730-7268
卷号34期号:8页码:1693-1704
英文摘要

There are multiple sources of biological and technical variation in a typical ecotoxicology study that may not be revealed by traditional endpoints but that become apparent in an omics dataset. As researchers increasingly apply omics technologies to environmental studies, it will be necessary to understand and control the main source(s) of variability to facilitate meaningful interpretation of such data. For instance, can variability in omics studies be addressed by changing the approach to study design and data analysis? Are there statistical methods that can be employed to correctly interpret omics data and make use of unattributed, inherent variability? The present study presents a review of experimental design and statistical considerations applicable to the use of omics methods in systems toxicology studies. In addition to highlighting potential sources that contribute to experimental variability, this review suggests strategies with which to reduce and/or control such variability so as to improve reliability, reproducibility, and ultimately the application of omics data for systems toxicology. Environ Toxicol Chem 2015;34:1693-1704. (c) 2015 SETAC


英文关键词Variability;Systems toxicology;Metabolomics;Proteomics;Transcriptomics
语种英语
WOS记录号WOS:000358373500002
来源期刊ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY
来源机构美国环保署
文献类型期刊论文
条目标识符http://gcip.llas.ac.cn/handle/2XKMVOVA/60802
作者单位1.Environm Canada, Emerging Methods Sect, Aquat Contaminants Res Div, Water Sci & Technol Directorate, Toronto, ON, Canada;
2.Axys Analyt Serv, Sidney, BC, Canada;
3.Univ Waterloo, Dept Biol, Waterloo, ON N2L 3G1, Canada;
4.US EPA, Ecosyst Res Div, Natl Exposure Res Lab, Off Res & Dev, Athens, GA USA;
5.Univ Florida, Ctr Environm & Human Toxicol, Gainesville, FL USA;
6.Univ Florida, Dept Physiol Sci, Gainesville, FL 32610 USA
推荐引用方式
GB/T 7714
Simmons, Denina B. D.,Benskin, Jonathan P.,Cosgrove, John R.,et al. Omics for aquatic ecotoxicology: Control of extraneous variability to enhance the analysis of environmental effects[J]. 美国环保署,2015,34(8):1693-1704.
APA Simmons, Denina B. D..,Benskin, Jonathan P..,Cosgrove, John R..,Duncker, Bernard P..,Ekman, Drew R..,...&Sherry, James P..(2015).Omics for aquatic ecotoxicology: Control of extraneous variability to enhance the analysis of environmental effects.ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY,34(8),1693-1704.
MLA Simmons, Denina B. D.,et al."Omics for aquatic ecotoxicology: Control of extraneous variability to enhance the analysis of environmental effects".ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY 34.8(2015):1693-1704.
条目包含的文件
条目无相关文件。
个性服务
推荐该条目
保存到收藏夹
导出为Endnote文件
谷歌学术
谷歌学术中相似的文章
[Simmons, Denina B. D.]的文章
[Benskin, Jonathan P.]的文章
[Cosgrove, John R.]的文章
百度学术
百度学术中相似的文章
[Simmons, Denina B. D.]的文章
[Benskin, Jonathan P.]的文章
[Cosgrove, John R.]的文章
必应学术
必应学术中相似的文章
[Simmons, Denina B. D.]的文章
[Benskin, Jonathan P.]的文章
[Cosgrove, John R.]的文章
相关权益政策
暂无数据
收藏/分享

除非特别说明,本系统中所有内容都受版权保护,并保留所有权利。