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DOI10.1002/jat.3281
Integrated decision strategies for skin sensitization hazard
Strickland, Judy1; Zang, Qingda1; Kleinstreuer, Nicole1; Paris, Michael1; Lehmann, David M.2; Choksi, Neepa1; Matheson, Joanna3; Jacobs, Abigail4; Lowit, Anna5; Allen, David1; Casey, Warren6
发表日期2016-09-01
ISSN0260-437X
卷号36期号:9页码:1150-1162
英文摘要

One of the top priorities of the Interagency Coordinating Committee for the Validation of Alternative Methods (ICCVAM) is the identification and evaluation of non-animal alternatives for skin sensitization testing. Although skin sensitization is a complex process, the key biological events of the process have been well characterized in an adverse outcome pathway (AOP) proposed by the Organisation for Economic Co-operation and Development (OECD). Accordingly, ICCVAM is working to develop integrated decision strategies based on the AOP using in vitro, in chemico and in silico information. Data were compiled for 120 substances tested in the murine local lymph node assay (LLNA), direct peptide reactivity assay (DPRA), human cell line activation test (h-CLAT) and KeratinoSens assay. Data for six physicochemical properties, which may affect skin penetration, were also collected, and skin sensitization read-across predictions were performed using OECD QSAR Toolbox. All data were combined into a variety of potential integrated decision strategies to predict LLNA outcomes using a training set of 94 substances and an external test set of 26 substances. Fifty-four models were built using multiple combinations of machine learning approaches and predictor variables. The seven models with the highest accuracy (89-96% for the test set and 96-99% for the training set) for predicting LLNA outcomes used a support vector machine (SVM) approach with different combinations of predictor variables. The performance statistics of the SVM models were higher than any of the non-animal tests alone and higher than simple test battery approaches using these methods. These data suggest that computational approaches are promising tools to effectively integrate data sources to identify potential skin sensitizers without animal testing. Published 2016. This article has been contributed to by US Government employees and their work is in the public domain in the USA.


The Interagency Coordinating Committee for the Validation of Alternative Methods (ICCVAM) evaluated a non-animal decision strategies to predict skin sensitization. Machine learning approaches integrated in vitro, in chemico and in silico data and six physicochemical properties for 120 substances to predict murine local lymph node assay (LLNA) outcomes. The seven models with the highest accuracy used a support vector machine with different combinations of predictor variables. The models outperformed individual non-animal methods and test batteries. This suggests that computational approaches are promising tools to effectively integrate data to identify potential skin sensitizers without animal testing.


英文关键词skin sensitization;allergic contact dermatitis;integrated decision strategy;machine learning;LLNA;DPRA;KeratinoSens;h-CLAT;support vector machine
语种英语
WOS记录号WOS:000379954000008
来源期刊JOURNAL OF APPLIED TOXICOLOGY
来源机构美国环保署
文献类型期刊论文
条目标识符http://gcip.llas.ac.cn/handle/2XKMVOVA/60705
作者单位1.ILS, Res Triangle Pk, NC 27709 USA;
2.US EPA, NHEERL, EPHD, CIB, Res Triangle Pk, NC 27709 USA;
3.US Consumer Prod Safety Commiss, Bethesda, MD 20814 USA;
4.US FDA, CDER, Silver Spring, MD 20993 USA;
5.US EPA, OCSPP, OPP, HED, Washington, DC 20460 USA;
6.NIEHS, NIH, DNTP, NICEATM, Res Triangle Pk, NC 27709 USA
推荐引用方式
GB/T 7714
Strickland, Judy,Zang, Qingda,Kleinstreuer, Nicole,et al. Integrated decision strategies for skin sensitization hazard[J]. 美国环保署,2016,36(9):1150-1162.
APA Strickland, Judy.,Zang, Qingda.,Kleinstreuer, Nicole.,Paris, Michael.,Lehmann, David M..,...&Casey, Warren.(2016).Integrated decision strategies for skin sensitization hazard.JOURNAL OF APPLIED TOXICOLOGY,36(9),1150-1162.
MLA Strickland, Judy,et al."Integrated decision strategies for skin sensitization hazard".JOURNAL OF APPLIED TOXICOLOGY 36.9(2016):1150-1162.
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