Climate Change Data Portal
| DOI | 10.1002/ece3.11117 |
| Detection of evolutionary conserved and accelerated genomic regions related to adaptation to thermal niches in Anolis lizards | |
| 发表日期 | 2024 |
| ISSN | 2045-7758 |
| 起始页码 | 14 |
| 结束页码 | 3 |
| 卷号 | 14期号:3 |
| 英文摘要 | Understanding the genetic basis for adapting to thermal environments is important due to serious effects of global warming on ectothermic species. Various genes associated with thermal adaptation in lizards have been identified mainly focusing on changes in gene expression or the detection of positively selected genes using coding regions. Only a few comprehensive genome-wide analyses have included noncoding regions. This study aimed to identify evolutionarily conserved and accelerated genomic regions using whole genomes of eight Anolis lizard species that have repeatedly adapted to similar thermal environments in multiple lineages. Evolutionarily conserved genomic regions were extracted as regions with overall sequence conservation (regions with fewer base substitutions) across all lineages compared with the neutral model. Genomic regions that underwent accelerated evolution in the lineage of interest were identified as those with more base substitutions in the target branch than in the entire background branch. Conserved elements across all branches were relatively abundant in intergenic genomic regions among noncoding regions. Accelerated regions (ARs) of each lineage contained a significantly greater proportion of noncoding RNA genes than the entire multiple alignment. Common genes containing ARs within 5 kb of their vicinity in lineages with similar thermal habitats were identified. Many genes associated with circadian rhythms and behavior were found in hot-open and cool-shaded habitat lineages. These genes might play a role in contributing to thermal adaptation and assist future studies examining the function of genes involved in thermal adaptation via genome editing. |
| 英文关键词 | accelerated evolution; Anolis; comparative genomics; reptiles; thermal adaptation |
| 语种 | 英语 |
| WOS研究方向 | Environmental Sciences & Ecology ; Evolutionary Biology |
| WOS类目 | Ecology ; Evolutionary Biology |
| WOS记录号 | WOS:001180981700001 |
| 来源期刊 | ECOLOGY AND EVOLUTION
 |
| 文献类型 | 期刊论文 |
| 条目标识符 | http://gcip.llas.ac.cn/handle/2XKMVOVA/299211 |
| 作者单位 | Tohoku University; Universidad de la Habana; National Institutes of Natural Sciences (NINS) - Japan; National Institute for Basic Biology (NIBB); Graduate University for Advanced Studies - Japan; National Institutes of Natural Sciences (NINS) - Japan; National Institute for Basic Biology (NIBB); Okazaki Institute for Integrative Bioscience (OIIB); University of Tsukuba; University of Miami |
| 推荐引用方式 GB/T 7714 | . Detection of evolutionary conserved and accelerated genomic regions related to adaptation to thermal niches in Anolis lizards[J],2024,14(3). |
| APA | (2024).Detection of evolutionary conserved and accelerated genomic regions related to adaptation to thermal niches in Anolis lizards.ECOLOGY AND EVOLUTION,14(3). |
| MLA | "Detection of evolutionary conserved and accelerated genomic regions related to adaptation to thermal niches in Anolis lizards".ECOLOGY AND EVOLUTION 14.3(2024). |
| 条目包含的文件 | 条目无相关文件。 | |||||
| 个性服务 |
| 推荐该条目 |
| 保存到收藏夹 |
| 导出为Endnote文件 |
| 谷歌学术 |
| 谷歌学术中相似的文章 |
| 百度学术 |
| 百度学术中相似的文章 |
| 必应学术 |
| 必应学术中相似的文章 |
| 相关权益政策 |
| 暂无数据 |
| 收藏/分享 |
除非特别说明，本系统中所有内容都受版权保护，并保留所有权利。
