气候变化领域集成服务门户(CCPortal): Characterization of 23 microsatellite markers and development of multiplex PCRs for the Amur viper Gloydius saxatilis (Viperidae) and cross-species amplification in other Gloydius species

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DOI	10.4238/gmr19095
	Characterization of 23 microsatellite markers and development of multiplex PCRs for the Amur viper Gloydius saxatilis (Viperidae) and cross-species amplification in other Gloydius species
	Jeon, H. S.; Lee, M. Y.; Kim, J. A.; Do, M. S.; Kim, I. N.; Choi, W. J.; An, J.
发表日期	2024
EISSN	1676-5680
起始页码	23
结束页码	1
卷号	23 期号:1
英文摘要	The Amur viper (family Viperidae), Gloydius saxatilis (Emelianov, 1937) is found in Russia, China, and the Korean Peninsula, and suffers from considerable poaching pressure driven by financial incentives. Its unique distribution has attracted attention as an indicator species for climate change. Herein, we report the isolation and characterization of 23 novel microsatellite loci in G. saxatilis using next-generation sequencing technology consisting of six multiplex panels. We collected 42 muscle samples from G. saxatilis that had either been road-killed or captured at various natural sites in South Korea. Twenty-two samples were collected from Gangwon-do, four from Gyeonggi-do, nine from Gyeongsang-do, five from Jella-do, and two from Chungcheong-do. The observed and expected heterozygosities of the loci varied from 0.447 to 0.937 and 0.436 to 0.815, respectively. The number of alleles per locus ranged from four to 15. All loci were in Hardy-Weinberg equilibrium, and no linkage disequilibrium was detected among any pairs of the loci. Examination of cross-species amplification showed that 20 loci were transferable to two other Gloydius snakes (G. ussuriensis and G. brevicaudus) and helped in identifying each species and hybrid. The six multiplex panels of 23 polymorphic microsatellite loci will play an important role in future population genetic studies and in the conservation and management of the Gloydius species.
英文关键词	Gloydius saxatilis; Microsatellite marker; Cross-species amplification; Population genetics
语种	英语
WOS研究方向	Biochemistry & Molecular Biology ; Genetics & Heredity
WOS类目	Biochemistry & Molecular Biology ; Genetics & Heredity
WOS记录号	WOS:001228917500001
来源期刊	GENETICS AND MOLECULAR RESEARCH
文献类型	期刊论文
条目标识符	http://gcip.llas.ac.cn/handle/2XKMVOVA/298604
作者单位	National Institute of Biological Resources; National Forensic Service; Incheon National University; Kangwon National University
推荐引用方式 GB/T 7714	Jeon, H. S.,Lee, M. Y.,Kim, J. A.,et al. Characterization of 23 microsatellite markers and development of multiplex PCRs for the Amur viper Gloydius saxatilis (Viperidae) and cross-species amplification in other Gloydius species[J],2024,23(1).
APA	Jeon, H. S..,Lee, M. Y..,Kim, J. A..,Do, M. S..,Kim, I. N..,...&An, J..(2024).Characterization of 23 microsatellite markers and development of multiplex PCRs for the Amur viper Gloydius saxatilis (Viperidae) and cross-species amplification in other Gloydius species.GENETICS AND MOLECULAR RESEARCH,23(1).
MLA	Jeon, H. S.,et al."Characterization of 23 microsatellite markers and development of multiplex PCRs for the Amur viper Gloydius saxatilis (Viperidae) and cross-species amplification in other Gloydius species".GENETICS AND MOLECULAR RESEARCH 23.1(2024).