气候变化领域集成服务门户(CCPortal): A genome and gene catalog of the aquatic microbiomes of the Tibetan Plateau

CCPortal

DOI	10.1038/s41467-024-45895-8
	A genome and gene catalog of the aquatic microbiomes of the Tibetan Plateau
	Cheng, Mingyue; Luo, Shuai; Zhang, Peng; Xiong, Guangzhou; Chen, Kai; Jiang, Chuanqi; Yang, Fangdian; Huang, Hanhui; Yang, Pengshuo; Liu, Guanxi; Zhang, Yuhao; Ba, Sang; Yin, Ping; Xiong, Jie; Miao, Wei; Ning, Kang
发表日期	2024
EISSN	2041-1723
起始页码	15
结束页码	1
卷号	15 期号:1
英文摘要	The Tibetan Plateau supplies water to nearly 2 billion people in Asia, but climate change poses threats to its aquatic microbial resources. Here, we construct the Tibetan Plateau Microbial Catalog by sequencing 498 metagenomes from six water ecosystems (saline lakes, freshwater lakes, rivers, hot springs, wetlands and glaciers). Our catalog expands knowledge of regional genomic diversity by presenting 32,355 metagenome-assembled genomes that de-replicated into 10,723 representative genome-based species, of which 88% were unannotated. The catalog contains nearly 300 million non-redundant gene clusters, of which 15% novel, and 73,864 biosynthetic gene clusters, of which 50% novel, thus expanding known functional diversity. Using these data, we investigate the Tibetan Plateau aquatic microbiome's biogeography along a distance of 2,500 km and >5 km in altitude. Microbial compositional similarity and the shared gene count with the Tibetan Plateau microbiome decline along with distance and altitude difference, suggesting a dispersal pattern. The Tibetan Plateau Microbial Catalog stands as a substantial repository for high-altitude aquatic microbiome resources, providing potential for discovering novel lineages and functions, and bridging knowledge gaps in microbiome biogeography.
语种	英语
WOS研究方向	Science & Technology - Other Topics
WOS类目	Multidisciplinary Sciences
WOS记录号	WOS:001164810100017
来源期刊	NATURE COMMUNICATIONS
文献类型	期刊论文
条目标识符	http://gcip.llas.ac.cn/handle/2XKMVOVA/293285
作者单位	Huazhong University of Science & Technology; Chinese Academy of Sciences; Institute of Hydrobiology, CAS; Huazhong Agricultural University; Tibet University; Chinese Academy of Sciences
推荐引用方式 GB/T 7714	Cheng, Mingyue,Luo, Shuai,Zhang, Peng,et al. A genome and gene catalog of the aquatic microbiomes of the Tibetan Plateau[J],2024,15(1).
APA	Cheng, Mingyue.,Luo, Shuai.,Zhang, Peng.,Xiong, Guangzhou.,Chen, Kai.,...&Ning, Kang.(2024).A genome and gene catalog of the aquatic microbiomes of the Tibetan Plateau.NATURE COMMUNICATIONS,15(1).
MLA	Cheng, Mingyue,et al."A genome and gene catalog of the aquatic microbiomes of the Tibetan Plateau".NATURE COMMUNICATIONS 15.1(2024).