气候变化领域集成服务门户(CCPortal): Seasonal dynamics of the coastal bacterioplankton at intensive fish-farming areas of the Yellow Sea; China revealed by high-throughput sequencing

CCPortal

DOI	10.1016/j.marpolbul.2018.12.052
	Seasonal dynamics of the coastal bacterioplankton at intensive fish-farming areas of the Yellow Sea; China revealed by high-throughput sequencing
	Jing X.; Gou H.; Gong Y.; Ji Y.; Su X.; Zhang J.; Han M.; Xu L.; Wang T.
发表日期	2019
ISSN	0025326X
起始页码	366
结束页码	375
卷号	139
英文摘要	Marine aquaculture areas are facing stressed environmental challenges, especially the degradation of coastal ecosystems. Here a coordinated time-series study was used to investigate the coastal bacterioplankton biodiversity dynamics of the Yellow Sea, China. Bacterial 16S rRNA gene sequencing revealed a temporal pattern of decreasing of diversity in summer. Functional prediction indicated that metabolic pathways related to the adenosine triphosphate (ATP)-binding cassette transporters and other membrane transporters were significantly enriched in May, while the genetic information processing category was most abundant in March. The May microbiomes showed most significant positive correlation with phosphate concentration, while the August and November microbiomes correlated with temperature and chemical oxygen demand (COD) most, and the March microbiomes showed significant correlation with Cu2+ level, pH and salinity. The correlations between representative bacteria and environmental parameters revealed in this study may provide insights into the potential influences of human aquaculture activities, on the biodiversity of coastal bacterioplankton. © 2018
英文关键词	Bacterioplankton diversity; Marine aquaculture; Pyrosequencing
语种	英语
scopus关键词	Adenosinetriphosphate; Aquaculture; Biodiversity; Ecosystems; Genes; RNA; 16S rRNA gene sequencing; Bacterioplanktons; Environmental challenges; Environmental parameter; High-throughput sequencing; Marine aquaculture; Phosphate concentration; Pyrosequencing; Chemical oxygen demand; ABC transporter; arsenic; cadmium; chlorophyll a; copper ion; dissolved oxygen; inorganic nitrogen; lead; nitrogen; phosphate; phosphorus; unclassified drug; RNA 16S; sea water; aquaculture production; bacterioplankton; biodiversity; chemical oxygen demand; coastal zone; concentration (composition); correlation; genetic analysis; human activity; RNA; seasonal variation; species diversity; time series analysis; Actinobacteria; Alphaproteobacteria; Article; autumn; bacterioplankton; Bacteroidetes; biodiversity; chemical oxygen demand; China; concentration (parameter); controlled study; correlation analysis; cyanobacterium; Firmicutes; Gammaproteobacteria; genetic information processing; high throughput sequencing; information processing; Lentisphaerae; microbial community; microbial diversity; microbiome; nonhuman; nutrient; pH; phylum; pisciculture; Planctomycetes; Proteobacteria; pyrosequencing; RNA sequence; salinity; seasonal variation; species richness; summer; time series analysis; Verrucomicrobia; water temperature; winter; Yellow Sea; aquaculture; bacterium; ecosystem; genetics; high throughput sequencing; metabolism; microbial consortium; microbiology; phylogeny; plankton; season; Pacific Ocean; Yellow Sea; Bacteria (microorganisms); Aquaculture; Bacteria; Biodiversity; China; Ecosystem; High-Throughput Nucleotide Sequencing; Microbial Consortia; Phosphates; Phylogeny; Plankton; RNA, Ribosomal, 16S; Salinity; Seasons; Seawater; Water Microbiology
来源期刊	Marine Pollution Bulletin
文献类型	期刊论文
条目标识符	http://gcip.llas.ac.cn/handle/2XKMVOVA/150130
作者单位	Single-Cell Center, CAS Key Laboratory of Biofuels and Shandong Key Laboratory of Energy Genetics, Qingdao Institute of BioEnergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, Shandong, China; University of Chinese Academy of Sciences, Beijing, China; Key Laboratory of Molecular Biophysics of the Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, Hubei 430074, China; Shandong Key Laboratory of Disease Control in Mariculture, Marine Biology Institute of Shandong Province, Qingdao, Shandong, China
推荐引用方式 GB/T 7714	Jing X.,Gou H.,Gong Y.,et al. Seasonal dynamics of the coastal bacterioplankton at intensive fish-farming areas of the Yellow Sea; China revealed by high-throughput sequencing[J],2019,139.
APA	Jing X..,Gou H..,Gong Y..,Ji Y..,Su X..,...&Wang T..(2019).Seasonal dynamics of the coastal bacterioplankton at intensive fish-farming areas of the Yellow Sea; China revealed by high-throughput sequencing.Marine Pollution Bulletin,139.
MLA	Jing X.,et al."Seasonal dynamics of the coastal bacterioplankton at intensive fish-farming areas of the Yellow Sea; China revealed by high-throughput sequencing".Marine Pollution Bulletin 139(2019).